BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C05SP1|AL427733
(840 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig580 1612 0.0
>3x_Contig580
Length = 2708
Score = 1612 bits (808), Expect = 0.0
Identities = 819/828 (98%)
Strand = Plus / Plus
Query: 13 gactattccattctcggaataaagakattcaatcattttgttcagaataaaaccaagtct 72
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 807 gactattccattctcgtaataaagagattcaatcattttgttcagaataaaaccaagtct 866
Query: 73 aggacattttcatttaacttaatccactttttcatgaaatttatcgccattcaaggtgcc 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 aggacattttcatttaacttaatccactttttcatgaaatttatcgccattcaaggtgcc 926
Query: 133 tgggcaacaatttcgtcagttattagttttgttccaacaatgttgctcagacgtattttg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 tgggcaacaatttcgtcagttattagttttgttccaacaatgttgctcagacgtattttg 986
Query: 193 gagtatgttgaagatcaatcaactgctccattaaatttggcttggatgtatatttttctt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 gagtatgttgaagatcaatcaactgctccattaaatttggcttggatgtatatttttctt 1046
Query: 253 atgttccttgccagaattttaactgccatatgtgctgctcaggcgctatttttagggaga 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 atgttccttgccagaattttaactgccatatgtgctgctcaggcgctatttttagggaga 1106
Query: 313 agggtttgtatcagaatgaaggctatcataatttctgaaatctactccaaggctttgaga 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 agggtttgtatcagaatgaaggctatcataatttctgaaatctactccaaggctttgaga 1166
Query: 373 agaaaaatttctccaaattccactaaggagccaactgatgtcgttgatccacaggaatta 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 agaaaaatttctccaaattccactaaggagccaactgatgtcgttgatccacaggaatta 1226
Query: 433 aatgacaaacaacacgttgatggagatgaagaatcagcaaccactgcaaatcttggtgct 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 aatgacaaacaacacgttgatggagatgaagaatcagcaaccactgcaaatcttggtgct 1286
Query: 493 atcattaatttgatggcggtggatgctttcaaagtatccgaaatatgtgcgtatttgcac 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 atcattaatttgatggcggtggatgctttcaaagtatccgaaatatgtgcgtatttgcac 1346
Query: 553 tcctttatagaggcgatcatcatgaccattgttgcattattccttttatatcggttaata 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 tcctttatagaggcgatcatcatgaccattgttgcattattccttttatatcggttaata 1406
Query: 613 ggctggtctgctttagttggtagtgcaatgattatttgcttcttaccattgaacttcaaa 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 ggctggtctgctttagttggtagtgcaatgattatttgcttcttaccattgaacttcaaa 1466
Query: 673 cttgcsagcttgttagggacactccaaaagaratccttggsaatcacagataaaagartt 732
||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||
Sbjct: 1467 cttgccagcttgttagggacactccaaaagaaatccttggcaatcacagataaaagaatt 1526
Query: 733 sagaaactaaacgragctttccaggccattcgtattatcaaattcttctcttgggaagag 792
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 cagaaactaaacgaagctttccaggccattcgtattatcaaattcttctcttgggaagag 1586
Query: 793 aattttgaaaaggacatacaaaacacaagggatgargaattaaatatg 840
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1587 aattttgaaaaggacatacaaaacacaagggatgaagaattaaatatg 1634
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6673
Number of Sequences: 1807
Number of extensions: 6673
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 840
length of database: 10,358,551
effective HSP length: 16
effective length of query: 824
effective length of database: 10,329,639
effective search space: 8511622536
effective search space used: 8511622536
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)